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Research Output 1996 2019

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Article
2019
2 Citations (Scopus)

Australian rice varieties vary in grain yield response to heat stress during reproductive and grain filling stages

Ali, F., Waters, D. L. E., Ovenden, B., Bundock, P., Raymond, C. A. & Rose, T. J., Apr 2019, In : Journal of Agronomy and Crop Science. 205, 2, p. 179-187 9 p.

Research output: Contribution to journalArticle

filling period
heat stress
grain yield
rice
flowering

Bromoperoxidase producing bacillus spp. isolated from the hypobranchial glands of a muricid mollusc are capable of tyrian purple precursor biogenesis

Ngangbam, A. K., Mouatt, P., Smith, J., Waters, D. L. E. & Benkendorff, K., 01 Jan 2019, In : Marine Drugs. 17, 5, 264.

Research output: Contribution to journalArticle

Open Access
File
Mollusca
Bacillus
Agar
Liquid Chromatography
Sulfates

Chemical volatiles present in cotton gin trash: A by-product of cotton processing

Egbuta, M. A., McIntosh, S., Waters, D. L. E., Vancov, T. & Liu, L., 18 Sep 2019, In : PLoS One. 14, 9, p. 1-17 17 p., e0222146.

Research output: Contribution to journalArticle

Open Access
cotton gin trash
Terpenes
volatile compounds
Cotton
Byproducts

Heat stress during grain fill reduces head rice yield through genotype dependant increased husk biomass and grain breakage

Ali, F., Waters, D. L. E., Ovenden, B., Bundock, P., Raymond, C. A. & Rose, T. J., 01 Nov 2019, In : Journal of Cereal Science. 90, 102820.

Research output: Contribution to journalArticle

hulls
Biomass
heat stress
Hot Temperature
Head
2018

Optimization of an In Vitro Starch Digestibility Assay for Rice

Khatun, A., Waters, D. L. E. & Liu, L., 01 Nov 2018, In : Starch/Staerke. 70, 11-12, p. 1-9 9 p., 1700340.

Research output: Contribution to journalArticle

Starch
Assays
digestibility
Glucose Oxidase
starch
3 Citations (Scopus)

Rice grain protein composition influences head rice yield

Balindong, J. L., Ward, R. M., Rose, T. J., Liu, L., Raymond, C. A., Snell, P. J., Ovenden, B. W. & Waters, D. L. E., Mar 2018, In : Cereal Chemistry. 95, 2, p. 253-263 11 p.

Research output: Contribution to journalArticle

rice protein
grain protein
protein composition
Head
rice
9 Citations (Scopus)

Rice grain protein composition influences instrumental measures of rice cooking and eating quality

Balindong, J. L., Ward, R., Liu, L., Rose, T., Pallas, L., Ovenden, B. W., Snell, P. J. & Waters, D. LE., 01 Jan 2018, In : Journal of Cereal Science. 79, 1, p. 35-42 8 p.

Research output: Contribution to journalArticle

rice protein
grain protein
Cooking
protein composition
cooking

Transcriptional response of rice flag leaves to restricted external phosphorus supply during grain filling in rice cv. Ir64

Jeong, K., Pantoja, O., Baten, A., Waters, D., Kretzschmar, T., Wissuwa, M., Julia, C. C., Heuer, S. & Rose, T. J., 13 Sep 2018, In : PLoS One. 13, 9, p. 1-19 19 p., e0203654.

Research output: Contribution to journalArticle

Open Access
File
filling period
Phosphorus
Genes
flowering
phosphorus
2017
2 Citations (Scopus)

Analysis of Lysophospholipid content in low phytate rice mutants

Tong, C., Chen, Y., Tan, Y., Liu, L., Waters, D. L. E., Rose, T. J., Shu, Q. & Bao, J., Jun 2017, In : Journal of Agricultural and Food Chemistry. 65, 26, p. 5435-5441 7 p.

Research output: Contribution to journalArticle

Lysophospholipids
Phytic Acid
phytic acid
rice
mutants
5 Downloads (Pure)

Genotypic variation in wheat flour lysophospholipids

Liu, L., Guo, Q., He, Z., Xia, X., Waters, D. L. E., Raymond, C. A. & King, G. J., 01 Jun 2017, In : Molecules. 22, 6, p. 1-10 10 p., 909.

Research output: Contribution to journalArticle

Open Access
File
Lysophospholipids
flour
wheat
starches
Flour
12 Citations (Scopus)
6 Downloads (Pure)

Phosphorus remobilization from rice flag leaves during grain filling: An RNA-seq study

Jeong, K., Baten, A., Waters, D. L. E., Pantoja, O., Julia, C. C., Wissuwa, M., Heuer, S., Kretzschmar, T. & Rose, T. J., 01 Jan 2017, In : Plant Biotechnology Journal. 15, 1, p. 15-26 12 p.

Research output: Contribution to journalArticle

Open Access
File
Starvation
filling period
Phosphorus
RNA
phosphorus
1 Citation (Scopus)
1 Downloads (Pure)

Prospects for genetic improvement in internal nitrogen use efficiency in rice

Rose, T. J., Kretzschmar, T., Waters, D. LE., Balindong, J. L. & Wissuwa, M., 2017, In : Agronomy. 7, 4, p. 1-12 12 p., 70.

Research output: Contribution to journalArticle

Open Access
File
nutrient use efficiency
genetic improvement
grain protein
harvest index
rice
5 Citations (Scopus)
4 Downloads (Pure)

Remobilisation of phosphorus fractions in rice flag leaves during grain filling: Implications for photosynthesis and grain yields

Jeong, K., Julia, C. C., Waters, D. L. E., Pantoja, O., Wissuwa, M., Heuer, S., Liu, L. & Rose, T. J., 01 Nov 2017, In : PLoS One. 12, 11, p. 1-15 15 p., e0187521.

Research output: Contribution to journalArticle

Open Access
File
Photosynthesis
filling period
Phosphorus
grain yield
photosynthesis
2016
2 Citations (Scopus)
3 Downloads (Pure)

Association mapping and marker development of genes for starch lysophospholipid synthesis in rice

Chuan, T., Lei, L., Waters, D. L. E. & Jin-song, B., 01 Nov 2016, In : Rice Science. 23, 6, p. 287-296 10 p.

Research output: Contribution to journalArticle

Open Access
File
Lysophospholipids
Starch
chromosome mapping
starch
rice
5 Citations (Scopus)
wild rice
Phosphorus
rice
tolerance
phosphorus
5 Citations (Scopus)

Optimisation and standardisation of extraction and HPLC analysis of rice grain protein

Balindong, J. L., Liu, L., Ward, R. M., Barkla, B. J. & Waters, D. L. E., 01 Nov 2016, In : Journal of Cereal Science. 72, p. 124-130 7 p.

Research output: Contribution to journalArticle

High pressure liquid chromatography
rice protein
grain protein
standardization
Standardization
1 Citation (Scopus)

Phenolic compounds and antioxidant capacity of brown rice in China

Ye, L., Zhou, S., Liu, L., Liu, L., Waters, D. L. E., Zhong, K., Zhou, X., Ma, X. & Liu, X., 01 Aug 2016, In : International Journal of Food Engineering. 12, 6, p. 537-546 10 p.

Research output: Contribution to journalArticle

brown rice
Antioxidants
phenolic compounds
China
antioxidants
3 Citations (Scopus)
2 Downloads (Pure)

Transcriptome of the Australian mollusc Dicathais orbita provides insights into the biosynthesis of indoles and choline esters

Baten, A., Ngangbam, A. K., Waters, D. L. E. & Benkendorff, K., 01 Jul 2016, In : Marine Drugs. 14, 7, p. 14 7 p., 135.

Research output: Contribution to journalArticle

Open Access
File
Indoles
Mollusca
Choline
Transcriptome
Esters
2015
6 Citations (Scopus)

Characterization of bacterial communities associated with the Tyrian purple producing gland in a marine gastropod

Ngangbam, A. K., Baten, A., Waters, D. L. E., Whalan, S. & Benkendorff, K., 21 Oct 2015, In : PLoS One. 10, 10, p. 1-19 19 p., e0140725.

Research output: Contribution to journalArticle

Open Access
Gastropoda
bacterial communities
Foot
Bacteria
bacteria

Genome wide polymorphisms and yield heterosis in rice (Oryza sativa subsp. indica)

Waters, D. L. E., Subbaiyan, G. K., Mani, E., Singh, S., Vaddadi, S., Baten, A. & Henry, R. J., 01 Dec 2015, In : Tropical Plant Biology. 8, 3-4, p. 117-125 9 p.

Research output: Contribution to journalArticle

Hybrid Vigor
heterosis
Oryza sativa
Single Nucleotide Polymorphism
genetic polymorphism
4 Citations (Scopus)

Indole-producing bacteria from the biosynthetic organs of a muricid mollusc could contribute to tyrian purple production

Ngangbam, A. K., Waters, D. L. E., Whalan, S., Baten, A. & Benkendorff, K., 01 Aug 2015, In : Journal of Shellfish Research. 34, 2, p. 443-454 12 p.

Research output: Contribution to journalArticle

indoles
mollusc
molluscs
bacterial communities
bacterium
43 Citations (Scopus)
1 Downloads (Pure)

Relationships of wild and domesticated rices (Oryza AA genome species) based upon whole chloroplast genome sequences

Wambugu, P. W., Brozynska, M., Furtado, A., Waters, D. L. & Henry, R. J., 10 Sep 2015, In : Scientific Reports. 5, p. 1-9 9 p., 13957.

Research output: Contribution to journalArticle

Open Access
File
Chloroplast Genome
Genome
Gene Pool
Chloroplasts
Phylogeny
10 Citations (Scopus)

The contribution of lysophospholipids to pasting and thermal properties of nonwaxy rice starch

Tong, C., Liu, L., Waters, D. L. E., Huang, Y. & Bao, J., 24 Jul 2015, In : Carbohydrate Polymers. 133, p. 187-193 7 p., 10103.

Research output: Contribution to journalArticle

Lysophospholipids
Starch
Thermodynamic properties
Amylose
Viscosity
2014
21 Citations (Scopus)

Australian wild rice reveals pre-domestication origin of polymorphism deserts in rice genome

Gopala, K. S., Waters, D. L. E. & Henry, R. J., 06 Jun 2014, In : PLoS One. 9, 6, p. 1-6 6 p., e98843.

Research output: Contribution to journalArticle

Open Access
domestication
Polymorphism
deserts
Genes
genetic polymorphism
23 Citations (Scopus)

Determination of starch lysophospholipids in rice using liquid chromatography-mass spectrometry (LC-MS)

Liu, L., Tong, C., Bao, J., Waters, D. L. E., Rose, T. J. & King, G. J., 23 Jun 2014, In : Journal of Agricultural and Food Chemistry. 62, 28, p. 6600-6607 8 p.

Research output: Contribution to journalArticle

Lysophospholipids
rice starch
Liquid chromatography
Liquid Chromatography
Starch
8 Citations (Scopus)

Genotypic variation in lysophospholipids of milled rice

Tong, C., Liu, L., Waters, D. L. E., Rose, T. J., Bao, J. & King, G. J., 24 Sep 2014, In : Journal of Agricultural and Food Chemistry. 62, 38, p. 9353-9361 9 p.

Research output: Contribution to journalArticle

Lysophospholipids
rice
lysophosphatidylcholine
Lysophosphatidylcholines
starch
2 Citations (Scopus)

Wild Oryza grain physico-chemical properties

Kasem, S., Waters, D. L. E., Ward, R. M., Rice, N. F. & Henry, R. J., Mar 2014, In : Tropical Plant Biology. 7, 1, p. 13-18 6 p.

Research output: Contribution to journalArticle

Oryza
physicochemical properties
rice
amylopectin
amylose
2013
22 Citations (Scopus)
1 Downloads (Pure)

Molecular relationships between Australian annual wild rice, Oryza meridionalis, and two related perennial forms

Sotowa, M., Ootsuka, K., Kobayashi, Y., Hao, Y., Tanaka, K., Ichitani, K., Flowers, J. M., Purugganan, M. D., Nakamura, I., Sato, Y. I., Sato, T., Crayn, D., Simon, B., Waters, D. L. E., Henry, R. J. & Ishikawa, R., 2013, In : Rice. 6, 26, p. 1-18 18 p.

Research output: Contribution to journalArticle

Open Access
File
wild rice
Oryza rufipogon
rice
genome
nuclear genome
2012
14 Citations (Scopus)

Analysis of adaptive ribosomal gene diversity in wild plant populations from contrasting climatic environments

Shapter, F. M., Fitzgerald, T. L., Waters, D. L. E., McDonald, S., Chivers, I. H., Nevo, E. & Henry, R. J., Jun 2012, In : Plant Signaling and Behavior. 7, 6, p. 602-604 3 p.

Research output: Contribution to journalArticle

wild plants
genes
plant adaptation
wild relatives
dryers
8 Citations (Scopus)

Analysis of starch gene diversity in the wild relatives of Oryza sativa

Kasem, S., Waters, D. L. E. & Henry, R. J., Dec 2012, In : Tropical Plant Biology. 5, 4, p. 286-308 23 p.

Research output: Contribution to journalArticle

wild relatives
Starch
exons
Oryza sativa
Exons
23 Citations (Scopus)
3 Downloads (Pure)

Application of large-scale sequencing to marker discovery in plants

Henry, R. J., Edwards, M., Waters, D. L. E., Gopala Krishnan, S., Bundock, P., Sexton, T. R., Masouleh, A. K., Nock, C. J. & Pattemore, J., Nov 2012, In : Journal of Biosciences. 37, 5, p. 829-841 13 p.

Research output: Contribution to journalArticle

Open Access
File
Genes
genes
Genome
genome
transcriptomics
54 Citations (Scopus)

Chloroplast genome sequence confirms distinctness of Australian and Asian wild rice

Waters, D. L. E., Nock, C. J., Ishikawa, R., Rice, N. & Henry, R. J., 2012, In : Ecology and Evolution. 2, 1, p. 211-217 7 p.

Research output: Contribution to journalArticle

Open Access
wild rice
chloroplast
Oryza sativa
rice
genome
95 Citations (Scopus)

Genome-wide DNA polymorphisms in elite indica rice inbreds discovered by whole-genome sequencing

Subbaiyan, G. K., Waters, D. L. E., Katiyar, S. K., Sadananda, A. R., Vaddadi, S. & Henry, R. J., Aug 2012, In : Plant Biotechnology Journal. 10, 6, p. 623-634 12 p.

Research output: Contribution to journalArticle

Open Access
single nucleotide polymorphism
Single Nucleotide Polymorphism
genetic polymorphism
Genome
rice
70 Citations (Scopus)
3 Downloads (Pure)

SNP in starch biosynthesis genes associated with nutritional and functional properties of rice

Kharabian-Masouleh, A., Waters, D. L. E., Reinke, R. F., Ward, R. & Henry, R. J., 2012, In : Scientific Reports. 2, p. 1-9 9 p., 557.

Research output: Contribution to journalArticle

Open Access
File
Starch
Single Nucleotide Polymorphism
Genes
Cooking
Breeding
2011
174 Citations (Scopus)

Chloroplast genome sequences from total DNA for plant identification

Nock, C. J., Waters, D. L. E., Edwards, M. A., Bowen, S. G., Rice, N., Cordeiro, G. M. & Henry, R. J., Apr 2011, In : Plant Biotechnology Journal. 9, 3, p. 328-333 6 p.

Research output: Contribution to journalArticle

Open Access
Chloroplast Genome
Plant DNA
DNA
Chloroplasts
High-Throughput Nucleotide Sequencing
36 Citations (Scopus)

Discovery of polymorphisms in starch-related genes in rice germplasm by amplification of pooled DNA and deeply parallel sequencing

Kharabian-Masouleh, A., Waters, D. L. E., Reinke, R. F. & Henry, R. J., Dec 2011, In : Plant Biotechnology Journal. 9, 9, p. 1074-1085 12 p.

Research output: Contribution to journalArticle

Open Access
Starch
germplasm
Starch Synthase
Single Nucleotide Polymorphism
genetic polymorphism
30 Citations (Scopus)

Genome diversity in wild grasses under environmental stress

Fitzgerald, T. L., Shapter, F. M., McDonald, S., Waters, D. L. E., Chivers, I. H., Drenth, A., Nevo, E. & Henry, R. J., 27 Dec 2011, In : Proceedings of the National Academy of Sciences of the United States of America. 108, 52, p. 21140-21145 6 p.

Research output: Contribution to journalArticle

Poaceae
Hordeum
Genome
Chloroplast Genome
Population
3 Citations (Scopus)

The endosperm morphology of rice and its wild relatives as observed by scanning electron microscopy

Kasem, S., Waters, D. L. E., Rice, N. F., Shapter, F. M. & Henry, R. J., Mar 2011, In : Rice. 4, 1, p. 12-20 9 p.

Research output: Contribution to journalArticle

wild relatives
Zizania aquatica
endosperm
Oryza sativa
scanning electron microscopy
2010
30 Citations (Scopus)

Australian Oryza: Utility and conservation

Henry, R. J., Rice, N., Waters, D. L. E., Kasem, S., Ishikawa, R., Hao, Y., Dillon, S., Crayn, D., Wing, R. & Vaughan, D., Dec 2010, In : Rice. 3, 4, p. 235-241 7 p.

Research output: Contribution to journalArticle

Oryza
rice
wild population
Oryza australiensis
Oryza officinalis
42 Citations (Scopus)

Fragrance in rice (Oryza sativa) is associated with reduced yield under salt treatment

Fitzgerald, T. L., Waters, D. L. E., Brooks, L. O. & Henry, R. J., May 2010, In : Environmental and Experimental Botany. 68, 3, p. 292-300 9 p.

Research output: Contribution to journalArticle

Oryza sativa
rice
odors
aldehyde
salt
52 Citations (Scopus)

Melting the secrets of gelatinisation temperature in rice

Cuevas, R. P., Daygon, V. D., Corpuz, H. M., Nora, L., Reinke, R. F., Waters, D. L. E. & Fitzgerald, M. A., 2010, In : Functional Plant Biology. 37, 5, p. 439-447 9 p.

Research output: Contribution to journalArticle

alkali spreading value
Differential Scanning Calorimetry
differential scanning calorimetry
melting
Freezing
12 Citations (Scopus)

Whole grain morphology of Australian rice species

Kasem, S., Waters, D. L. E., Rice, N., Shapter, F. M. & Henry, R. J., Apr 2010, In : Plant Genetic Resources: Characterisation and Utilisation. 8, 1, p. 74-81 8 p.

Research output: Contribution to journalArticle

whole grain foods
rice
wild rice
Oryza sativa
colored varieties
2009
25 Citations (Scopus)
matrix-assisted laser desorption-ionization mass spectrometry
Matrix-Assisted Laser Desorption-Ionization Mass Spectrometry
agronomic traits
Single Nucleotide Polymorphism
Mass Spectrometry
2008
23 Citations (Scopus)

Endonucleolytic mutation analysis by internal labeling (EMAIL)

Cross, M. J., Waters, D. L. E., Lee, L. S. & Henry, R. J., Mar 2008, In : Electrophoresis. 29, 6, p. 1291-1301 11 p.

Research output: Contribution to journalArticle

Labeling
Mutation
Coloring Agents
Labels
Endonucleases
119 Citations (Scopus)

Inactivation of an aminoaldehyde dehydrogenase is responsible for fragrance in rice

Bradbury, L. M. T., Gillies, S. A., Brushett, D. J., Waters, D. L. E. & Henry, R. J., Nov 2008, In : Plant Molecular Biology. 68, 4-5, p. 439-449 11 p.

Research output: Contribution to journalArticle

inactivation
betaine
Oxidoreductases
odors
rice
24 Citations (Scopus)

The effect of salt on betaine aldehyde dehydrogenase transcript levels and 2-acetyl-1-pyrroline concentration in fragrant and non-fragrant rice (Oryza sativa)

Fitzgerald, T. L., Waters, D. L. E. & Henry, R. J., Oct 2008, In : Plant Science. 175, 4, p. 539-546 8 p.

Research output: Contribution to journalArticle

Betaine-Aldehyde Dehydrogenase
Oryza sativa
Salts
salts
rice
2006
93 Citations (Scopus)

Gelatinization temperature of rice explained by polymorphisms in starch synthase

Waters, D. L. E., Henry, R. J., Reinke, R. F. & Fitzgerald, M. A., Jan 2006, In : Plant Biotechnology Journal. 4, 1, p. 115-122 8 p.

Research output: Contribution to journalArticle

Starch Synthase
starch synthase
genetic polymorphism
rice
Temperature

Screening for the rice blast resistance gene Pi-ta using LNA displacement probes and real-time PCR

Kennedy, B. G., Waters, D. LE. & Henry, R. J., 2006, In : Molecular Breeding. 18, 3, p. 185-193 9 p.

Research output: Contribution to journalArticle

24 Citations (Scopus)

The ripening wine grape berry skin transcriptome

Waters, D. L. E., Holton, T. A., Ablett, E. M., Slade Lee, L. & Henry, R. J., Jul 2006, In : Plant Science. 171, 1, p. 132-138 7 p.

Research output: Contribution to journalArticle

wine grapes
Wine
Vitis
Microarrays
Transcriptome
2005
124 Citations (Scopus)

A perfect marker for fragrance genotyping in rice

Bradbury, L. M. T., Henry, R. J., Jin, Q., Reinke, R. F. & Waters, D. L. E., Nov 2005, In : Molecular Breeding. 16, 4, p. 279-283 5 p.

Research output: Contribution to journalArticle

Fragrances
genotyping
Amplification
Betaine-Aldehyde Dehydrogenase
Alleles