Genetic diversity and population dynamics of wild Mozambique tilapia (Oreochromis mossambicus) in South Africa

Urbanisation and water developments in South Africa have created numerous challenges in managing water resources. Consequently, the native fish species Oreochromis mossambicus, prominent to freshwater ecosystems in South Africa now faces the threat of extinction amidst introductions of alien Oreochromis species. The species has recently been classified as Vulnerable on the IUCN Red List. Despite the economic importance of O. mossambicus within the South African region, little is known about the genetic and population dynamics of the species. In this study, we aimed to establish baseline genetic and population data, and determine the impact of water management practices on population structure. This data is crucial for the conservation and monitoring of this species across South Africa. The study revealed relatively low genetic diversity within sample localities but significant differentiation among populations. The analyses identified 16 geographically correlated genetic clusters, indicating substantial differentiation across catchments. Anthropogenic activities, changes in catchment use, and water management strategies significantly influenced the genetic population structure in the studied regions. Given the distinct genetic patterns, conservation-oriented management should prioritise maintaining existing genetic diversity to ensure the long-term survival of this vulnerable species.