Mining genomes for improved product quality and human nutrition

Robert, J. Henry; Louis M.T. Bradbury; Peter Bundock; Giovanni M. Cordeiro; Michael J. Cross; Allison C. Crawford; Timothy L. Fitzgerald; Liz Izgueirdo; BG Kennedy; L. Slade Lee; Shane McIntosh; Toni Pacey-Miller; Nicole Rice; Frances M. Shapter; Loraine Watson; Jessica F. White; Daniel LE Waters

Mining genomes for improved product quality and human nutrition

Robert, J. Henry, Louis M.T. Bradbury, Peter Bundock, Giovanni M. Cordeiro, Michael J. Cross, Allison C. Crawford, Timothy L. Fitzgerald, Liz Izgueirdo, BG Kennedy, L. Slade Lee, Shane McIntosh, Toni Pacey-Miller, Nicole Rice, Frances M. Shapter, Loraine Watson, Jessica F. White, Daniel LE Waters

Biomedical Sciences

Research output: Other contribution to conference › Other › peer-review

Abstract

Analysis of polymorphisms at the SNP level has been facilitated by the development and application of a range of new tools. New approaches to polymorphism detection such as robust allele specific PCR, RT-PCR with novel chemistries, pyrosequencing and primer extension assay by mass analysis, allow high throughput screening of large numbers of genes. These tools have accelerated the rate of discovery of the DNA sequence variations linked to important genetic traits. Examples of recent associations made in our work, include the discovery of the basis of fragrance and gelatinization temperature in rice. We have established a Plant DNA bank to collect and store genomic DNA from native and mutated genotypes for use in allele mining and genomic diversity studies. The bank is now being mined for alleles contributing to improved cereal grain quality and human nutrition in barley, rice, sorghum and wheat. SAGE and microarray analysis are being used to extend the range of candidate genes subjected to polymorphism analysis.

Original language	English
Publication status	Published - 2006
Event	Plant and Animal Genomes Conference XIV - Duration: 14 Jan 2006 → 18 Jan 2006

Conference

Conference	Plant and Animal Genomes Conference XIV
Period	14/01/06 → 18/01/06

Access to Document

http://epubs.scu.edu.au/cpcg_pubs/278/

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Henry, R. J., Bradbury, L. M. T., Bundock, P., Cordeiro, G. M., Cross, M. J., Crawford, A. C., Fitzgerald, T. L., Izgueirdo, L., Kennedy, BG., Slade Lee, L., McIntosh, S., Pacey-Miller, T., Rice, N., Shapter, F. M., Watson, L., White, J. F., & Waters, D. LE. (2006). Mining genomes for improved product quality and human nutrition. Plant and Animal Genomes Conference XIV, . http://epubs.scu.edu.au/cpcg_pubs/278/

Henry, Robert, J. ; Bradbury, Louis M.T. ; Bundock, Peter ; Cordeiro, Giovanni M. ; Cross, Michael J. ; Crawford, Allison C. ; Fitzgerald, Timothy L. ; Izgueirdo, Liz ; Kennedy, BG ; Slade Lee, L. ; McIntosh, Shane ; Pacey-Miller, Toni ; Rice, Nicole ; Shapter, Frances M. ; Watson, Loraine ; White, Jessica F. ; Waters, Daniel LE. / Mining genomes for improved product quality and human nutrition. Plant and Animal Genomes Conference XIV, .

@conference{beb8fc11c48047378a3d0e47810d06fd,

title = "Mining genomes for improved product quality and human nutrition",

abstract = "Analysis of polymorphisms at the SNP level has been facilitated by the development and application of a range of new tools. New approaches to polymorphism detection such as robust allele specific PCR, RT-PCR with novel chemistries, pyrosequencing and primer extension assay by mass analysis, allow high throughput screening of large numbers of genes. These tools have accelerated the rate of discovery of the DNA sequence variations linked to important genetic traits. Examples of recent associations made in our work, include the discovery of the basis of fragrance and gelatinization temperature in rice. We have established a Plant DNA bank to collect and store genomic DNA from native and mutated genotypes for use in allele mining and genomic diversity studies. The bank is now being mined for alleles contributing to improved cereal grain quality and human nutrition in barley, rice, sorghum and wheat. SAGE and microarray analysis are being used to extend the range of candidate genes subjected to polymorphism analysis.",

author = "Henry, {Robert, J.} and Bradbury, {Louis M.T.} and Peter Bundock and Cordeiro, {Giovanni M.} and Cross, {Michael J.} and Crawford, {Allison C.} and Fitzgerald, {Timothy L.} and Liz Izgueirdo and BG Kennedy and {Slade Lee}, L. and Shane McIntosh and Toni Pacey-Miller and Nicole Rice and Shapter, {Frances M.} and Loraine Watson and White, {Jessica F.} and Waters, {Daniel LE}",

year = "2006",

language = "English",

note = "Plant and Animal Genomes Conference XIV ; Conference date: 14-01-2006 Through 18-01-2006",

}

Henry, RJ, Bradbury, LMT, Bundock, P, Cordeiro, GM, Cross, MJ, Crawford, AC, Fitzgerald, TL, Izgueirdo, L, Kennedy, BG, Slade Lee, L, McIntosh, S, Pacey-Miller, T, Rice, N, Shapter, FM, Watson, L, White, JF & Waters, DLE 2006, 'Mining genomes for improved product quality and human nutrition', Plant and Animal Genomes Conference XIV, 14/01/06 - 18/01/06. <http://epubs.scu.edu.au/cpcg_pubs/278/>

Mining genomes for improved product quality and human nutrition. / Henry, Robert, J.; Bradbury, Louis M.T.; Bundock, Peter; Cordeiro, Giovanni M.; Cross, Michael J.; Crawford, Allison C.; Fitzgerald, Timothy L.; Izgueirdo, Liz; Kennedy, BG; Slade Lee, L.; McIntosh, Shane; Pacey-Miller, Toni; Rice, Nicole; Shapter, Frances M.; Watson, Loraine; White, Jessica F.; Waters, Daniel LE.

2006. Plant and Animal Genomes Conference XIV, .

Research output: Other contribution to conference › Other › peer-review

TY - CONF

T1 - Mining genomes for improved product quality and human nutrition

AU - Henry, Robert, J.

AU - Bradbury, Louis M.T.

AU - Bundock, Peter

AU - Cordeiro, Giovanni M.

AU - Cross, Michael J.

AU - Crawford, Allison C.

AU - Fitzgerald, Timothy L.

AU - Izgueirdo, Liz

AU - Kennedy, BG

AU - Slade Lee, L.

AU - McIntosh, Shane

AU - Pacey-Miller, Toni

AU - Rice, Nicole

AU - Shapter, Frances M.

AU - Watson, Loraine

AU - White, Jessica F.

AU - Waters, Daniel LE

PY - 2006

Y1 - 2006

N2 - Analysis of polymorphisms at the SNP level has been facilitated by the development and application of a range of new tools. New approaches to polymorphism detection such as robust allele specific PCR, RT-PCR with novel chemistries, pyrosequencing and primer extension assay by mass analysis, allow high throughput screening of large numbers of genes. These tools have accelerated the rate of discovery of the DNA sequence variations linked to important genetic traits. Examples of recent associations made in our work, include the discovery of the basis of fragrance and gelatinization temperature in rice. We have established a Plant DNA bank to collect and store genomic DNA from native and mutated genotypes for use in allele mining and genomic diversity studies. The bank is now being mined for alleles contributing to improved cereal grain quality and human nutrition in barley, rice, sorghum and wheat. SAGE and microarray analysis are being used to extend the range of candidate genes subjected to polymorphism analysis.

AB - Analysis of polymorphisms at the SNP level has been facilitated by the development and application of a range of new tools. New approaches to polymorphism detection such as robust allele specific PCR, RT-PCR with novel chemistries, pyrosequencing and primer extension assay by mass analysis, allow high throughput screening of large numbers of genes. These tools have accelerated the rate of discovery of the DNA sequence variations linked to important genetic traits. Examples of recent associations made in our work, include the discovery of the basis of fragrance and gelatinization temperature in rice. We have established a Plant DNA bank to collect and store genomic DNA from native and mutated genotypes for use in allele mining and genomic diversity studies. The bank is now being mined for alleles contributing to improved cereal grain quality and human nutrition in barley, rice, sorghum and wheat. SAGE and microarray analysis are being used to extend the range of candidate genes subjected to polymorphism analysis.

M3 - Other

T2 - Plant and Animal Genomes Conference XIV

Y2 - 14 January 2006 through 18 January 2006

ER -